Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929829.1_cds_XP_016477039.1_68814
CDS Infomation

[gene=LOC107798542] [db_xref=GeneID:107798542] [protein=(-)-camphene/tricyclene synthase, chloroplastic-like isoform X1] [protein_id=XP_016477039.1] [location=complement(join(1808..2104,2268..2516,2737..2875,3016..3231,3499..3883,4236..4491,4621..4917))] [gbkey=CDS]
Sequence

ATGGACGTGGCAATATCTACCAACGTATGGATGCTGCACATGGCCACCTCCAAAATACCT
CCGCCACCAGCAGCTACTTGTTTAATTTCCTCTTTCAGCCGAGAAAAGCCGTCACTTGTA
TCAAAAGCCAGCTGCTTCTCTACCGCAGCTGCAGGCCGCAGCATGAAAACTGAACCATCA
CCTAATCAGTACTCTGCTATTTCATCTTCAGATCAAAATCTCTCTAGACGTTCAGGGAAT
TACCAACCTACCATGTGGGATTTTGAGTATATTCAGTCCATACACAATGATTATGCGGGA
GATAAGTATATGAAGCATTTTAACGAACTGAAGGAGGAAATGAAGAAGATAATAATGGCT
GAGGGATTAGAAGAATTAGAGAAGTTGGAGCTGATTGATAATTTGCAAAGGCTTGGAGTA
AGTTACCACTTCAGGGACGAAATTATGCAAATTTTGAGCAGCATAAACCAGCACAGTACT
TCAGCAGATTCATTATATGCCACAGCTCTGAAATTTAGGCTCTTGAGAGAACATGTATTT
CATATCTCTCAAGATATATTCAACAACTTCAAGGACGAAAATGACAATCTCAAGCAAAGT
ATTTGTAACGATACAAAAGGTTTGTTACAATTATATGAAGCATCATTTCTCGCTACAGAG
ACTGAAACCACTTTAAACTATGCCACAAGATTCACGACGACACATCTAAAGAATTATGTT
GACAATCATTGTGGTGATGAAGAAAATCTAATGGTCGCATTAGTACAACATGCCTTGGAA
CTTCCTAGGCATTGGATGATGCCAAGATTAGAGACAGAGTGGTATTTAAGCATTTATGAG
AGAATGTCAAGTTCTAATCCTCTGTTGCTTGAGCTTGCTAAGTTGGACTTTAACATTGTT
CAAGCAGCACACCAAAAAGATTTGAGAATTCTATCGAGGTGGTGGAAGAGCACATATTTA
GCAGAGTTGTCATTTTCAAGGGATAGAGTAGTGGAGGCTTTCTTTTGGACAGTGGGGTTA
CTATTTGAGCCTCAATACAGCTACTGCAGAAGAATGTTAACAAAGGTTATAGTTTTTATT
GTAGTCCTAGATGATATTTATGATGTTTTTGGCAGTCTTGACGAGATGGAAATCCTTACT
GATGCTGTTGAAAGATGGGATATAAAAGCAATGGAGCAGCTTCCAGACTATATGAAAATA
TGTTACCTTGCACTCTTCAACAGTACCAATGAAATGGCGTATGATATTCTCAAAGAGAAA
GGGATCAATGTCCTACCCTACTTTACAAGACAATGGGCAGATTTATGCAAAGCTTACTTA
CAAGAAGCAAGATGGTACTACAAAGGGTATAAGCCAACTCTGGAAGAATACATAGATAAT
GCATGGATTTCAATTGCAACTCCTTTGATATTAGTCCATGCATTCTTCTTTGTCACCAAT
CCAATTACAAAAGAGGCATTGGAGTCCTTAAACAAATATCCTGACATAATTCGTCGGTGT
GCTATAATTAATCGTTTTCTTGATGACTTGGGGACATCATCGGAAGAGTTAAAAAGGGGT
GATGTTTCCAAGTCAATTCAATGTTTTATGAATGAGAAGGGTGTTTCCGAAGAAGAGGCA
AAAGAAGGAATTAGAATTTTGATAAAGGAGACATGGGAACTGATGAACAAAGACCAAATG
GAAGAGCTACTATTTTCTGAAACATTTATTGGGATTGCATTAAATTTTTCAAGAGCATCA
CACTGCATGTATCAGCATGGAGATGGGCATGGAATTCAAAATTCTCACATCATAAATCGG
ATTTCCAAACTACTTTTTGAGCCTATCACAATTCTATAG

Peptide Sequence

PEP ID

XP_016477039.1
PEP Infomation

PREDICTED: (-)-camphene/tricyclene synthase, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MDVAISTNVWMLHMATSKIPPPPAATCLISSFSREKPSLVSKASCFSTAAAGRSMKTEPS
PNQYSAISSSDQNLSRRSGNYQPTMWDFEYIQSIHNDYAGDKYMKHFNELKEEMKKIIMA
EGLEELEKLELIDNLQRLGVSYHFRDEIMQILSSINQHSTSADSLYATALKFRLLREHVF
HISQDIFNNFKDENDNLKQSICNDTKGLLQLYEASFLATETETTLNYATRFTTTHLKNYV
DNHCGDEENLMVALVQHALELPRHWMMPRLETEWYLSIYERMSSSNPLLLELAKLDFNIV
QAAHQKDLRILSRWWKSTYLAELSFSRDRVVEAFFWTVGLLFEPQYSYCRRMLTKVIVFI
VVLDDIYDVFGSLDEMEILTDAVERWDIKAMEQLPDYMKICYLALFNSTNEMAYDILKEK
GINVLPYFTRQWADLCKAYLQEARWYYKGYKPTLEEYIDNAWISIATPLILVHAFFFVTN
PITKEALESLNKYPDIIRRCAIINRFLDDLGTSSEELKRGDVSKSIQCFMNEKGVSEEEA
KEGIRILIKETWELMNKDQMEELLFSETFIGIALNFSRASHCMYQHGDGHGIQNSHIINR
ISKLLFEPITIL

Transcript Sequence

Gene sequence data has not been registered.